Resources

gkm-SVM software (PLOS Computational Biology 2014, Bioinformatics 2016)

deltaSVM software (Nature Genetics 2015)

ls-gkm software (Bioinformatics 2016)

deltaSVM ENCODE models (Human Mutation 2019)

kmer-SVM server (Nucleic Acids Research 2013) (out of date, use gkm-SVM)

P300 enhancers (Genome Research 2011) (out of date, use gkm-SVM)

Unix Tutorial 1

Unix Tutorial 2

Emacs Summary

Vi Command Summary

useful textbooks

useful JHU graduate courses

useful review articles

Twelve Things I Wish They Taught in School

Freeman Dyson discussing how to respond positively to criticism

Max Planck on how science progresses

Five rules for success

important information for recommendations

important information for PhD program applicants