Difference between revisions of "Resources"
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| + | [http://www.beerlab.org/dissertations PhD Dissertations from Beer lab] | ||
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[http://www.beerlab.org/gkmsvm gkm-SVM software (PLOS Computational Biology 2014, Bioinformatics 2016)] | [http://www.beerlab.org/gkmsvm gkm-SVM software (PLOS Computational Biology 2014, Bioinformatics 2016)] | ||
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[http://www.beerlab.org/p300enhancer P300 enhancers (Genome Research 2011) (out of date, use gkm-SVM)] | [http://www.beerlab.org/p300enhancer P300 enhancers (Genome Research 2011) (out of date, use gkm-SVM)] | ||
| − | [http://www.ee.surrey.ac.uk/Teaching/Unix/ Unix Tutorial] | + | [http://www.ee.surrey.ac.uk/Teaching/Unix/ Unix Tutorial 1] |
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| + | [https://www.unixtutorial.org/basic-unix-commands Unix Tutorial 2] | ||
[http://www.rgrjr.com/emacs/emacs_cheat.html Emacs Summary] | [http://www.rgrjr.com/emacs/emacs_cheat.html Emacs Summary] | ||
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| + | [https://www.atmos.albany.edu/daes/atmclasses/atm350/vi_cheat_sheet.pdf Vi Command Summary] | ||
[[useful textbooks]] | [[useful textbooks]] | ||
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| + | [[useful JHU graduate courses]] | ||
[[useful review articles]] | [[useful review articles]] | ||
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[[important information for recommendations]] | [[important information for recommendations]] | ||
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| + | [[important information for PhD program applicants]] | ||
Latest revision as of 02:28, 28 October 2025
PhD Dissertations from Beer lab
gkm-SVM software (PLOS Computational Biology 2014, Bioinformatics 2016)
deltaSVM software (Nature Genetics 2015)
ls-gkm software (Bioinformatics 2016)
deltaSVM ENCODE models (Human Mutation 2019)
kmer-SVM server (Nucleic Acids Research 2013) (out of date, use gkm-SVM)
P300 enhancers (Genome Research 2011) (out of date, use gkm-SVM)
Twelve Things I Wish They Taught in School
Freeman Dyson discussing how to respond positively to criticism
Max Planck on how science progresses